Mohamed Ibrahim Abouelhoda

Conference papers

• Mohamed Ibrahim Abouelhoda
  Algorithmen und Ein Software System für Genomvergleich (Algorithms and a Software System for Comparative Genome Analysis)
  In Ausgezeichnete Informatikdissertationen 2005, LNI-Dissertations D-6, GI, 2006 [Preprint (German)] [(English)]
  
  
• Christian Wawra, Mohamed Ibrahim Abouelhoda, Enno Ohlebusch
  Efficient Mapping of Large cDNA/EST Databases to Genomes: A Comparison of two Different Strategies
  Proceedings of the German Conference on Bioinformatics, pages 29-43, LNI 73, GI, 2005. [Preprint]
  
  
• Enno Ohlebusch, Mohamed Ibrahim Abouelhoda, Kathrin Hockel, Jan Stallkamp
  The Median Problem for the Reversal Distance in Circular Bacterial Genomes
  Proceedings of the 16th Annual Symposium on Combinatorial Pattern Matching, pages 116-127, LNCS 3537, 2005. © Springer-Verlag [Preprint]
  
  
• Mohamed Ibrahim Abouelhoda, Enno Ohlebusch
  CHAINER: Software for Comparing Genomes
  Short paper accepted at ISMB/ECCB 2004
  (12th International Conference on Intelligent Systems for Molecular Biology/3rd European Conference on Computational Biology)
  
  
• Mohamed Ibrahim Abouelhoda, Enno Ohlebusch
  A Local Chaining Algorithm and its Applications in Comparative Genomics
  Proceedings of the 3rd Workshop on Algorithms in Bioinformatics, pages 1-16, LNBI 2812, 2003.
  
  
• Mohamed Ibrahim Abouelhoda, Enno Ohlebusch
  Multiple Genome Alignment: Chaining Algorithms Revisited
  Proceedings of the 14th Annual Symposium on Combinatorial Pattern Matching, pages 1-16, LNCS 2676, 2003. © Springer-Verlag
  
  
• Mohamed Ibrahim Abouelhoda, Enno Ohlebusch, Stefan Kurtz
  Optimal Exact String Matching Based on Suffix Arrays
  Proceedings of the 9th International Symposium on String Processing and Information Retrieval, pages 31-43, LNCS 2476, 2002. © Springer-Verlag
  
  
• Mohamed Ibrahim Abouelhoda, Stefan Kurtz, Enno Ohlebusch
  The Enhanced Suffix Array and its Applications to Genome Analysis
  Proceedings of the 2nd Workshop on Algorithms in Bioinformatics, pages 449-463, LNCS 2452, 2002. © Springer-Verlag